Stop speculating. Without actual tests you can speculate about anything and that leads to myths in this hobby. I don't test for pH as much as I test for TDS, nitrites, gH. Ammonia is quickly absorbed, nitrites not so much. Both of them are deadly in low concentrations. Whether the bio filter is bombed or not it doesn't matter much as long as ammonia and nitrites are 0. Most of the bio filters are supersized when it comes to shrimp. It shouldn't be a problem if part of your bio filter dies as long as it still does it's job, keeping ammonia and nitrites undetectable.